Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
THCA | rs11231216 | chr11:62551859 | C/T | 8.33E-5 | 483 | 16.23 | 14.33 | 14.27 | KM Plot |
THCA | rs11231217 | chr11:62551872 | G/T | 8.33E-5 | 483 | 16.23 | 14.33 | 14.27 | KM Plot |
THCA | rs11231218 | chr11:62551961 | G/A | 8.29E-5 | 483 | 16.23 | 14.33 | 14.27 | KM Plot |
THCA | rs11231225 | chr11:62576585 | A/C | 7.62E-5 | 489 | 16.2 | 14.33 | 14.27 | KM Plot |
THCA | rs11231226 | chr11:62576590 | C/G | 7.66E-5 | 489 | 16.2 | 14.33 | 14.27 | KM Plot |
THCA | rs11231227 | chr11:62576847 | T/C | 7.62E-5 | 489 | 16.2 | 14.33 | 14.27 | KM Plot |
THCA | rs11231229 | chr11:62577570 | C/T | 7.66E-5 | 489 | 16.2 | 14.33 | 14.27 | KM Plot |
THCA | rs11231230 | chr11:62577734 | G/C | 7.66E-5 | 489 | 16.2 | 14.33 | 14.27 | KM Plot |
THCA | rs11231231 | chr11:62583868 | G/A | 7.68E-5 | 488 | 16.2 | 14.48 | 14.27 | KM Plot |
THCA | rs11231232 | chr11:62583941 | T/C | 7.68E-5 | 488 | 16.2 | 14.48 | 14.27 | KM Plot |
THCA | rs11231234 | chr11:62586649 | T/C | 7.68E-5 | 488 | 16.2 | 14.48 | 14.27 | KM Plot |
THCA | rs11231236 | chr11:62588666 | A/G | 7.68E-5 | 488 | 16.2 | 14.48 | 14.27 | KM Plot |
THCA | rs11231237 | chr11:62588787 | G/A | 7.68E-5 | 488 | 16.2 | 14.48 | 14.27 | KM Plot |
THCA | rs11231238 | chr11:62588851 | T/C | 7.68E-5 | 488 | 16.2 | 14.48 | 14.27 | KM Plot |
THCA | rs11231240 | chr11:62597198 | T/C | 7.89E-5 | 490 | 16.23 | 14.17 | 14.27 | KM Plot |